Deep Learning for Semantic Segmentation versus Classification in Computational Pathology: Application to mitosis analysis in Breast Cancer grading

dc.contributor.advisorRacoceanu, Daniel
dc.contributor.authorJiménez Garay, Gabriel Alexandroes_ES
dc.date.accessioned2019-04-12T17:41:44Zes_ES
dc.date.available2019-04-12T17:41:44Zes_ES
dc.date.created2019es_ES
dc.date.issued2019-04-12es_ES
dc.description.abstractExisting computational pathology approaches did not allow, yet, the emergence of effective/efficient computer-aided tools used as a second opinion for pathologists in the daily practice. Focusing on the case of computer-based qualification for breast cancer diagnosis, the present article proposes two deep learning architectures to efficiently and effectively detect and classify mitosis in a histopathological tissue sample. The first method consisted of two parts, entailing a preprocessing of the digital histological image and a free-handcrafted-feature Convolutional Neural Network (CNN) used for binary classification. Results show that the methodology proposed can achieve 95% accuracy in testing with an F1-score of 94.35%, which is higher than the results from the literature using classical image processing techniques and also higher than the approaches using handcrafted features combined with CNNs. The second approach was an end-to-end methodology using semantic segmentation. Results showed that this algorithm can achieve an accuracy higher than 95% in testing and an average Dice index of 0.6 which is higher than the results from the literature using CNNs (0.9 F1-score). Additionally, due to the semantic properties of the deep learning approach, an end-to-end deep learning framework is viable to perform both tasks: detection and classification of mitosis. The results showed the potential of deep learning in the analysis of Whole Slide Images (WSI) and its integration to computer-aided systems. The extension of this work to whole slide images is also addressed in the last two chapters; as well as, some computational key points that are useful when constructing a computer-aided-system inspired by the described technology.es_ES
dc.description.uriTrabajo de investigaciónes_ES
dc.identifier.urihttp://hdl.handle.net/20.500.12404/13969
dc.language.isoenges_ES
dc.publisherPontificia Universidad Católica del Perúes_ES
dc.publisher.countryPEes_ES
dc.rightsinfo:eu-repo/semantics/openAccesses_ES
dc.rights.urihttp://creativecommons.org/licenses/by/2.5/pe/*
dc.subjectMamas--Cáncer--Diagnósticoes_ES
dc.subjectCáncer--Diagnóstico por imágeneses_ES
dc.subjectHistologíaes_ES
dc.subject.ocdehttps://purl.org/pe-repo/ocde/ford#2.02.05es_ES
dc.titleDeep Learning for Semantic Segmentation versus Classification in Computational Pathology: Application to mitosis analysis in Breast Cancer gradinges_ES
dc.typeinfo:eu-repo/semantics/masterThesises_ES
renati.discipline613077es_ES
renati.levelhttps://purl.org/pe-repo/renati/level#maestroes_ES
renati.typehttps://purl.org/pe-repo/renati/type#trabajoDeInvestigaciones_ES
thesis.degree.disciplineProcesamiento de Señales e Imágenes Digitaleses_ES
thesis.degree.grantorPontificia Universidad Católica del Perú. Escuela de Posgradoes_ES
thesis.degree.levelMaestríaes_ES
thesis.degree.nameMaestro en Procesamiento de Señales e Imágenes Digitales.es_ES

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